
Microbiome, Neurobiology and Disease
2021-2023
A growing body of evidence shows that the gut microbiome affects the brain in both normal and disease states. This finding leads to a number of questions, among them what are the biochemical and biophysical steps that constitute the gut-brain axis? What are the signaling molecules that facilitate this communication and how do they work? Do changes to the microbiome initiate neurophysiological outcomes or are they lagging indicators of neurobiological events? This Scialog will bring together chemists, physicists, biologists and neurophysiologists to explore these and other issues with the goal of designing and launching innovative, cross-disciplinary studies with the potential to transform our understanding of this complex system.
Fellows & Facilitators
Fellows
- Marie-Claire Arrieta
Physiology and Pharmacology
University of Calgary
Annika Barber
Molecular Biology and Biochemistry
Rutgers
Heather Bean
Life Sciences
Arizona State University
Elizabeth Bess
Chemistry
University of California, Irvine
Michael Burton
Neuroscience
UT Dallas
Pamela Chang
Microbiology and Immunology
Cornell University
Ying-hui Chou
Psychology
University of Arizona
Annie Ciernia
Biochemistry & Molecular Biology
University of British Columbia
Stephanie Cologna
Chemistry
University of Illinois at Chicago
Kendall Corbin
Horticulture
University of Kentucky
Santiago Cuesta
Cell Biology and Neuroscience
Rutgers University – New Brunswick
David Durgan
Anesthesiology
Baylor College of Medicine
Seyedehaida Ebrahimi
Electrical Engineering and Biomedical Engineering
The Pennsylvania State University
Ukpong B. Eyo
Neuroscience
University of Virginia
Faranak Fattahi
Biochemistry and Biophysics
UCSF
Linnea Freeman
Biology
Furman University
Melanie Gareau
Anatomy, Physiology and Cell Biology
UC Davis
Nandita Garud
Ecology and Evolutionary Biology
University of California, Los Angeles
Chun-Jun Guo
Medicine
Weill Cornell Medical College
Gianna Hammer
Pathology
University of Utah
Stavroula Hatzios
Molecular, Cellular, and Developmental Biology / Microbial Sciences Institute
Yale University
Elaine Hsiao
Integrative Biology & Physiology
UCLA
Iliyan Iliev,
Medicine
Weill Cornell Medicine
Yang-Yu Liu
Medicine
Harvard Medical School
Erin Longbrake
Neurology
Yale University
Will Ludington
Embryology
Carnegie Institution
Sarah MacEachern
Pediatrics
University of Calgary
Thomas Mansell
Chemical and Biological Engineering
Iowa State University
Shikha Nangia
Biomedical and Chemical Engineering
Syracuse University
Mike O’Donnell
Molecular, Cellular and Developmental Biology
Yale University
Lisa Osborne
Microbiology & Immunology
University of British Columbia
Noah Palm
Immunobiology
Yale University
Leah Pyter
Psychiatry
Ohio State University
Ashley Ross
Chemistry
University of Cincinnati
Lisa Ryno
Chemistry and Biochemistry
Oberlin College
Rachel Saylor
Chemistry and Biochemistry
Oberlin College
Amina Schartup
Scripps Institution of Oceanography
University of California in San Diego
Dhara Shah
Mathematical & Natural Sciences
Arizona State University
Karthik Shekhar
Chemical & Biomolecular Engineering / Helen Wills Neuroscience Institute
University of California, Berkeley
Mei Shen
Chemistry, Neuroscience Program, Beckman Institute
University of Illinois at Urbana Champaign
Abhishek Shrivastava
Life Sciences
Arizona State University
Jaeyun Sung
Surgery
Mayo Clinic
Jhimmy Talbot
Basic Science Division
Fred Hutchinson Cancer Research Center
Carolina Tropini
Microbiology and Immunology, School of Biomedical Engineering
University of British Columbia
Harris Wang
Systems Biology
Columbia University
Hua Wang
Materials Science & Engineering
University of Illinois at Urbana-Champaign
Wenjing Wang
Life Sciences Institute / Chemistry
University of Michigan
Christopher Whidbey
Chemistry
Seattle University
Zongqi Xia
Neurology
University of Pittsburgh
Irene Yang
Nursing
Emory University
Kaixiong Ye
Genetics
University of Georgia
JP Yu
Radiology, Psychiatry, and Biomedical Engineering
University of Wisconsin-Madison
Kai Zhang
Biochemistry
University of Illinois at Urbana-Champaign
Yanjiao Zhou
Medicine
UConn Health
Facilitators
- Emily Balskus
Harvard University
Barbara Bendlin
University of Wisconsin - Robert Bryan
Baylor College of Medicine
Judith Eisen
University of Oregon
Rima Kaddurah-Daouk
Duke University Medical Center
Ali Keshavarzian
Rush University School of Medicine
Rosy Krajmalnik-Brown
Biodesign Institute
Arizona State University - Sarkis Mazmanian
California Institute of Technology
Raghuveer Parthasarathy
Physics
University of Oregon
George Weinstock
Jackson Laboratories
Team Awards
Goal: to advance fundamental understanding of the gut-brain axis and the roles microbiota play in neurodegenerative disorders.
2023 Team Awards
Could Feces be Used as a Natural Time Capsule for Mapping of Signal-Generating Hubs within the Gut?
- Abhishek Shrivastava
Life Sciences
Arizona State University - Kai Zhang
Biochemistry
University of Illinois at Urbana-Champaign
How Does the Microbiome-Gut-Brain Cascade Activate Glia? A Single-Cell Transcriptomic and Functional Roadmap in the Fruit Fly
- Will Ludington, Embryology, Carnegie Institution
Karthik Shekhar, Chemical & Biomolecular Engineering / Helen Wills Neuroscience Institute, University of California, Berkeley
Investigating the Influence of Air Pollution VOCs on Alzheimer’s Disease-Like Pathology
- Mei Shen
Chemistry, Neuroscience Program, Beckman Institute
University of Illinois at Urbana Champaign
Heather Bean
Life Sciences
Arizona State University
Yanjiao Zhou, Medicine, UConn Health
Decipher the “Molecular Language’ between Microbiota-Microglia Crosstalk Using a Genetically Tractable Microbiome
- Chun-Jun Guo
Medicine
Weill Cornell Medical College
Yanjiao Zhou
Medicine
UConn Health
Annie Ciernia
Biochemistry & Molecular Biology
University of British Columbia
Identification of Microglial Receptors for Microbiota Derived Metabolites
- Annie Ciernia
Biochemistry & Molecular Biology
University of British Columbia
Christopher Whidbey
Chemistry
Seattle University
The Role of Gut Metabolites in “Chemobrain”
- Stephanie Cologna
Chemistry
University of Illinois Chicago *
Leah Pyter
Psychiatry
Ohio State University
* Funded by Walder Foundation
Embracing Complexity: Exploring the Connections between Chronic Fatigue, Behavior, and Gut Microbiome Dysbiosis in Children with Neurodevelopmental Disorders
- Sarah MacEachern
Pediatrics
University of Calgary
Kendall Corbin
Horticulture
University of Kentucky
Heather Bean
Life Sciences
Arizona State University
Gut Catecholamine Levels as Modulators of Addiction Behaviors
- Dhara Shah
Mathematical & Natural Sciences
Arizona State University
Santiago Cuesta
Cell Biology and Neuroscience
Rutgers University
2022 Team Awards
Electrifying Mechanisms of Intestinal α-Synuclein Aggregation in Parkinson’s Disease Onset
- Elizabeth Bess
Chemistry
University of California, Irvine
Aida Ebrahimi
Electrical Engineering and Biomedical Engineering
Pennsylvania State University
Diurnal Rhythms in Microbiota-Gut-Brain Signaling Leads to Time-of-Day Dependent Susceptibility to Stroke
- Annika Barber
Molecular Biology and Biochemistry
Rutgers University
David Durgan
Anesthesiology
Baylor College of Medicine
The Intersection of Age, Microbiome and the Zeal for Continuous Learning by Cells of the Neuro-Immune Network
- Linnea Freeman
Biology
Furman University
Gianna Hammer
Immunology
University of Utah
Lisa Osborne
Microbiology & Immunology
University of British Columbia
Understanding the Protective Effect of Helminth Immunotherapy Through the Lens of the Gut-Brain Axis
- Lisa Osborne
Microbiology & Immunology
University of British Columbia
Ukpong Eyo
Neuroscience
University of Virginia
Unraveling the Effect and Mechanism of Enteric Microbiota-Neuron Communication in Aging
- Yanjiao Zhou
Medicine
UConn Health
Ashley Ross
Chemistry
University of Cincinnati
Identifying Mycobiome-Derived Enteric Neuromodulators
- Iliyan Iliev
Medicine
Weill Cornell Medicine
Faranak Fattahi
Biochemistry and Biophysics
University of California, San Francisco
Tracking Alpha-synuclein from Enteroendocrine Cells to the Enteric Nervous System
- Elizabeth Bess
Chemistry
University of California, Irvine
Stephanie Cologna
Chemistry
University of Illinois Chicago *
* Funded by Walder Foundation
2021 Team Awards
Harnessing the Microbiome to Combat the Neurotoxic Effects of Dietary Mercury
- Elaine Hsiao
Integrative Biology & Physiology
University of California, Los Angeles
Amina Schartup
Scripps Institution of Oceanography
Mei Shen
Chemistry, Neuroscience Program
Beckman Institute, University of Illinois at Urbana-Champaign
Do Aging Microbiomes Evolve Pathogenicity Via Gene Shedding? Using Evolutionary Theory to Deconstruct Microbiome-based Neurodegeneration
- Nandita Garud
Ecology and Evolutionary Biology
University of California, Los Angeles
Will Ludington
Embryology
Carnegie Institution
Do Bacterial Outer Membrane Vesicles (OMVs) Act as Modulators of Microbiota-brain Communication Involved in the Development of Neurological Diseases?
- David Durgan
Anesthesiology
Baylor College of Medicine
Abhishek Shrivastava
School of Life Sciences
Arizona State University
Species-specific Modulation of Human Enteric Neurons by Gut Microbiome Metabolites
- Faranak Fattahi
Biochemistry and Biophysics
University of California, San Francisco
Mark Mimee
Microbiology/Pritzker School of Molecular Engineering
University of Chicago
Engineering Enteric Neuron Activity to Enhance Antimicrobial Immunity in the Gut
- Maayan Levy
Microbiology
University of Pennsylvania
Ashley Ross
Chemistry
University of Cincinnati
Kai Zhang
Biochemistry
University of Illinois at Urbana-Champaign
Impact of Missing Microbes on Brain Development
- Carolina Tropini
Microbiology and Immunology, School of Biomedical Engineering
University of British Columbia
JP Yu
Radiology, Psychiatry, and Biomedical Engineering
University of Wisconsin-Madison
Conference Booklets
SPONSORS
- The Paul G. Allen Frontiers Group
- Frederick Gardner Cottrell Foundation
- Research Corporation for Science Advancement
Additional Support